10 representative publications ‒ UPDEPLA ‐ EPFL

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Mitochondrial haplotypes affect metabolic phenotypes in the Drosophila Genetic Reference Panel

R. P. J. Bevers; M. Litovchenko; A. Kapopoulou; V. S. Braman; M. R. Robinson et al.

Nature Metabolism. 2019-12-01. Vol. 1, num. 12, p. 1226-1242. DOI : 10.1038/s42255-019-0147-3.

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BRB-seq: ultra-affordable high-throughput transcriptomics enabled by bulk RNA barcoding and sequencing

D. Alpern; V. Gardeux; J. Russeil; B. Mangeat; A. C. A. Meireles-Filho et al.

Genome Biology. 2019-04-19. Vol. 20, p. 71. DOI : 10.1186/s13059-019-1671-x.

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A stromal cell population that inhibits adipogenesis in mammalian fat depots

P. Schwalie; H. Dong; M. Zachara; J. Russeil; D. Alpern et al.

Nature. 2018. Vol. 559, num. 7712, p. 103-108. DOI : 10.1038/s41586-018-0226-8.

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SMiLE-seq identifies binding motifs of single and dimeric transcription factors

A. Isakova; R. Groux; M. Imbeault; P. Rainer; D. Alpern et al.

Nature methods. 2017. Vol. 14, p. 316-322. DOI : 10.1038/nmeth.4143.

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The Genetics of Transcription Factor DNA Binding Variation

B. Deplancke; D. Alpern; V. Gardeux

Cell. 2016. Vol. 166, num. 3, p. 538-554. DOI : 10.1016/j.cell.2016.07.012.

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Population Variation and Genetic Control of Modular Chromatin Architecture in Humans

S. M. Waszak; O. Delaneau; A. R. Gschwind; H. Kilpinen; S. K. Raghav et al.

Cell. 2015. Vol. 162, num. 5, p. 1039-1050. DOI : 10.1016/j.cell.2015.08.001.

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Identification of the transcription factor ZEB1 as a central component of the adipogenic gene regulatory network

C. Gubelmann; P. C. Schwalie; S. K. Raghav; E. Roeder; T. Delessa et al.

Elife. 2014. Vol. 3, p. e03346. DOI : 10.7554/eLife.03346.

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Coordinated Effects of Sequence Variation on DNA Binding, Chromatin Structure, and Transcription

H. Kilpinen; S. M. Waszak; A. R. Gschwind; S. K. Raghav; R. M. Witwicki et al.

Science. 2013. Vol. 342, num. 6159, p. 744-747. DOI : 10.1126/science.1242463.

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Absolute quantification of transcription factors during cellular differentiation using multiplexed targeted proteomics

J. Simicevic; A. W. Schmid; P. A. Gilardoni; B. Zoller; S. K. Raghav et al.

Nature methods. 2013. Vol. 10, num. 6, p. 570-6. DOI : 10.1038/nmeth.2441.

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Integrative Genomics Identifies the Corepressor SMRT as a Gatekeeper of Adipogenesis through the Transcription Factors C/EBPβ and KAISO

S. K. Raghav; S. M. Waszak; I. Krier; C. Gubelmann; A. Isakova et al.

Molecular cell. 2012. Vol. 46, num. 3, p. 335-50. DOI : 10.1016/j.molcel.2012.03.017.

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