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2024

Microbial genome collection of aerobic granular sludge cultivated in sequencing batch reactors using different carbon source mixtures

J. S. Saini; A. Adler; L. Cardona; P. N. R. Ramirez; R. Pei et al.

Microbiology Resource Announcements. 2024-03-27. DOI : 10.1128/mra.00102-24.

2024

Microbial genome collection of aerobic granular sludge cultivated in sequencing batch reactors using different carbon source mixtures

Benchmarking informatics approaches for virus discovery: caution is needed when combining in silico identification methods

2023

Proteome adaptations of the organohalide-respiring Desulfitobacterium hafniense strain DCB-2 to various energy metabolisms

Environment rather than breed or body site shapes the skin bacterial community of healthy sheep as revealed by metabarcoding

Structure of a membrane-bound menaquinol:organohalide oxidoreductase

Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil

2022

Assessing the value of kinetic results from biochemical methane potential tests: Reproducibility from a large inter-laboratory study

Disentangle genus microdiversity within a complex microbial community by using a multi-distance long-read binning method: example of Candidatus Accumulibacter

Stoichiometry of the Gene Products From the Tetrachloroethene Reductive Dehalogenase Operon pceABCT

2021

Towards a standardization of biomethane potential tests: a commentary

2020

Multistability and Reversibility of Aerobic Granular Sludge Microbial Communities Upon Changes From Simple to Complex Synthetic Wastewater and Back

Improving Inter-Laboratory Reproducibility in Measurement of Biochemical Methane Potential (BMP)

Power and Limitations of Biochemical Methane Potential (BMP) Tests

Hybrid Transcriptional Regulators for the Screening of Target DNA Motifs in Organohalide-Respiring Bacteria

Impact of iron- and/or sulfate-reduction on a cis-1,2-dichloroethene and vinyl chloride respiring bacterial consortium: experiments and model-based interpretation

Investigation of Biogenic Passivating Layers on Corroded Iron

2019

Chlorinated ethene plume evolution after source thermal remediation: Determination of degradation rates and mechanisms

A modeling approach integrating microbial activity, mass transfer, and geochemical processes to interpret biological assays: An example for PCE degradation in a multi-phase batch setup

Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge

2018

Strain-level diversity drives alternative community types in millimetre-scale granular biofilms

Coexistence of two distinct Sulfurospirillum populations respiring tetrachloroethene-genomic and kinetic considerations

The Membrane-Bound C Subunit of Reductive Dehalogenases: Topology Analysis and Reconstitution of the FMN-Binding Domain of PceC

Modelling of C/Cl isotopic behaviour during chloroethene biotic reductive dechlorination: Capabilities and limitations of simplified and comprehensive models

Soluble and Solid Iron Reduction Assays with Desulfitobacterium hafniense

Editorial: Special issue on anaerobic biological dehalogenation

Bacterial iron reduction and biogenic mineral formation for the stabilisation of corroded iron objects

2017

Comparative genomics of the genus Desulfitobacterium

Arsenic methylation dynamics in a rice paddy soil anaerobic enrichment culture

Extraction of carotenoids from Chlorella vulgaris using green solvents and syngas production from residual biomass

Modeling Hydraulic Transport and Anaerobic Uptake by PAOs and GAOs During Wastewater Feeding in EBPR Granular Sludge Reactors

Methane Production of Full-Scale Anaerobic Digestion Plants Calculated from Substrate’s Biomethane Potentials Compares Well with the One Measured On-Site

Phytoremediation of soils contaminated by organic compounds: hype, hope and facts

Use of Bacteria To Stabilize Archaeological Iron

2016

Towards a standardization of biomethane potential tests

Laboratory and field scale bioremediation of hexachlorocyclohexane (HCH) contaminated soils by means of bioaugmentation and biostimulation

Indirect Evidence Link PCB Dehalogenation with Geobacteraceae in Anaerobic Sediment-Free Microcosms

Role of ammonia-oxidizing bacteria in micropollutant removal from wastewater with aerobic granular sludge

Validation of an integrative methodology to assess and monitor reductive dechlorination of chlorinated ethenes in contaminated aquifers

2015

Success and failure assessment methodology for wastewater and faecal sludge treatment projects in low-income countries

Harvesting of Chlorella sorokiniana by co-culture with the filamentous fungus Isaria fumosorosea: A potential sustainable feedstock for hydrothermal gasification

Temporal evolution of bacterial communities associated with the in situ wetland-based remediation of a marine shore porphyry copper tailings deposit

Sulfamethoxazole and isoproturon degradation and detoxification by a laccase-mediator system: Influence of treatment conditions and mechanistic aspects

Divergent PCB organohalide-respiring consortia enriched from the efflux channel of a former Delor manufacturer in Eastern Europe

Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23

2014

Multilevel Correlations in the Biological Phosphorus Removal Process: from Bacterial Enrichment to Conductivity-Based Metabolic Batch Tests and Polyphosphatase Assays

Multiple Dual C–Cl Isotope Patterns Associated with Reductive Dechlorination of Tetrachloroethene

Nitrogen Removal over Nitrite by Aeration Control in Aerobic Granular Sludge Sequencing Batch Reactors

Optimization of operation conditions for the startup of aerobic granular sludge reactors biologically removing carbon, nitrogen, and phosphorous

Linking bacterial population dynamics and nutrient removal in the granular sludge biofilm ecosystem engineered for wastewater treatment

Use of silicate minerals for long-term pH control during reductive dechlorination of high tetrachloroethene concentrations in continuous flow-through columns

Aerobic Granules: Microbial Landscape and Architecture, Stages, and Practical Implications

Use of silicate minerals for pH control during reductive dechlorination of chloroethenes in batch cultures of different microbial consortia

Control of groundwater pH during bioremediation: Improvement and validation of a geochemical model to assess the buffering potential of ground silicate minerals

Traitement des micropolluants à la STEP – Séparation du charbon actif en poudre par ultrafiltration en mode frontal

2013

Functional Genotyping of Sulfurospirillum spp. in Mixed Cultures Allowed the Identification of a New Tetrachloroethene Reductive Dehalogenase

Identification of trigger factors selecting for polyphosphate- and glycogen-accumulating organisms in aerobic granular sludge sequencing batch reactors

Assessment of bacterial and structural dynamics in aerobic granular sludge biofilms

Bacterial versus fungal laccase: potential for micropollutant degradation

Enantioselective Dehydrochlorination of delta-Hexachlorocyclohexane and delta-Pentachlorocyclohexene by LinA1 and LinA2 from Sphingobium indicum B90A

Diversity of cobalamin riboswitches in the corrinoid-producing organohalide respirer Desulfitobacterium hafniense

Optimized aeration strategies for nitrogen and phosphorus removal with aerobic granular sludge

Complete genome sequence of Dehalobacter restrictus PER-K23T

Changes in the Bacterial Community and lin Genes Diversity during Biostimulation of Indigenous Bacterial Community of Hexachlorocyclohexane (HCH) Dumpsite Soil

Influence of treatment conditions on the oxidation of micropollutants by Trametes versicolor laccase

Treatment of micropollutants in municipal wastewater: Ozone or powdered activated carbon?

Metabolomics of hexachlorocyclohexane (HCH) transformation: ratio of LinA to LinB determines metabolic fate of HCH isomers

The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics

Correlations between environmental variables and bacterial community structures suggest Fe(III) and vinyl chloride reduction as antagonistic terminal electron-accepting processes